BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020B10SP1|AL427581
(995 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1530 1842 0.0
3x_Contig66 706 0.0
>3x_Contig1530
Length = 6216
Score = 1842 bits (919), Expect = 0.0
Identities = 964/989 (97%), Gaps = 1/989 (0%)
Strand = Plus / Minus
Query: 1 taggccacactttcatggtttgtwttcacactgaaaatcaaaatcaaggggccttttacc 60
||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct: 4793 taggccacactttcatggtttgtattcacactgaaaatcaaaatcaaggggacttttacc 4734
Query: 61 cttttgttctactgghgctttctgttctccatgaktyccccttaggacatctgcgttatc 120
||||||||||||||| | |||||||||||||||| | |||||||||||||||||||||||
Sbjct: 4733 cttttgttctactggagatttctgttctccatgagtcccccttaggacatctgcgttatc 4674
Query: 121 gyttaacagatgtgccgccccagccaaactccccacctgacaatgtcttcaacccggmtc 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 4673 gtttaacagatgtgccgccccagccaaactccccacctgacaatgtcttcaacccggatc 4614
Query: 181 agcccgtataggactttgaatgctagamcgtggaaaatgawttccagctccgcttaattg 240
||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 4613 agcccgtataggactttgaatgctagaacgtggaaaatgaattccagctccgcttaattg 4554
Query: 241 ahtaagthaaghhactataaaggtagtggtatttcactggcgccgaagctcccacttatg 300
| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4553 aataagtaaagaaactataaaggtagtggtatttcactggcgccgaagctcccacttatg 4494
Query: 301 ctacaccctctatgtctcttcacaatgtcaaactagagtyaagctcaacagggtcttctt 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 4493 ctacaccctctatgtctcttcacaatgtcaaactagagtcaagctcaacagggtcttctt 4434
Query: 361 tccccgctgattctgccaagcccgttcccttggctgtggtttcgctagatagtagatagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4433 tccccgctgattctgccaagcccgttcccttggctgtggtttcgctagatagtagatagg 4374
Query: 421 gacagtgggaatctcgttaatccattcatgcgcgtyactaattagatgacgaggcatttg 480
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 4373 gacagtgggaatctcgttaatccattcatgcgcgtcactaattagatgacgaggcatttg 4314
Query: 481 gctaccttaagagagtcatagttactcccgccgtttacccgcgcttggttgattttcttc 540
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 4313 gctaccttaagagagtcatagttactcccgccgtttacccgcgcttggttgaatttcttc 4254
Query: 541 actttgacattcagagcactgggcagaaatcacattgcgtcaacatcactttctgaccat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4253 actttgacattcagagcactgggcagaaatcacattgcgtcaacatcactttctgaccat 4194
Query: 601 cgcaatgctatgttttttttagacagtyagattccccttgtccgtaccagttctwagttg 660
|||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 4193 cgcaatgctatgttttaattagacagtcagattccccttgtccgtaccagttctaagttg 4134
Query: 661 atcgttaattgctgctagcgacggtctacaagagacctaccaaggccgtctacgacaagg 720
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4133 atcgttaattgcagcaagcgacggtctacaagagacctaccaaggccgtctacgacaagg 4074
Query: 721 cccgcaagcagtccgtcccaccgagcaagcccagtaagacagtccacaagcatgcccgcc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4073 cccgcaagcagtccgtcccaccgagcaagcccagtaagacagtccacaagcatgcccgcc 4014
Query: 781 gcgtctgaccaaggccctcactgcccgatccttagagccaatccttatcccgaagttacg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4013 gcgtctgaccaaggccctcactgcccgatccttagagccaatccttatcccgaagttacg 3954
Query: 841 gatctattttgccgacttcccttatctacattattctatcaactagaggctgttcacctt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3953 gatctattttgccgacttcccttatctacattattctatcaactagaggctgttcacctt 3894
Query: 901 gggagacctgctgcggttatcagtacgacctggcatgaaaactattccttcctgtggatt 960
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3893 -ggagacctgctgcggttatcagtacgacctggcatgaaaactattccttcctgtggatt 3835
Query: 961 ttcaagggccgtcgcgggcgcacsggacc 989
||||||||||||||||||||||| |||||
Sbjct: 3834 ttcaagggccgtcgcgggcgcaccggacc 3806
>3x_Contig66
Length = 1023
Score = 706 bits (352), Expect = 0.0
Identities = 381/390 (97%), Gaps = 2/390 (0%)
Strand = Plus / Plus
Query: 601 cgcaatgctatgttttttttagacagtyagattccccttg-tccgtaccagttctwagtt 659
|||||||||||||||| ||||||||| |||||||||||| |||||||||||||| ||||
Sbjct: 4 cgcaatgctatgttttaattagacagtcagattccccttggtccgtaccagttctaagtt 63
Query: 660 gatcgttaattgctgctagcgacggtctacaagagacctaccaaggccgtctacgacaag 719
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 gatcgttaattgcagcaagcgacggtctacaagagacctaccaaggccgtctacgacaag 123
Query: 720 gcccgcaagcagtccgtcccaccgagcaagcccagtaagacagtccacaagcatgcccgc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 gcccgcaagcagtccgtcccaccgagcaagcccagtaagacagtccacaagcatgcccgc 183
Query: 780 cgcgtctgaccaaggccctcactgcccgatccttagagccaatccttatcccgaagttac 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 cgcgtctgaccaaggccctcactgcccgatccttagagccaatccttatcccgaagttac 243
Query: 840 ggatctattttgccgacttcccttatctacattattctatcaactagaggctgttcacct 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ggatctattttgccgacttcccttatctacattattctatcaactagaggctgttcacct 303
Query: 900 tgggagacctgctgcggttatcagtacgacctggcatgaaaactattccttcctgtggat 959
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 t-ggagacctgctgcggttatcagtacgacctggcatgaaaactattccttcctgtggat 362
Query: 960 tttcaagggccgtcgcgggcgcacsggacc 989
|||||||||||||||||||||||| |||||
Sbjct: 363 tttcaagggccgtcgcgggcgcaccggacc 392
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3750
Number of Sequences: 1807
Number of extensions: 3750
Number of successful extensions: 28
Number of sequences better than 1.0e-20: 2
length of query: 995
length of database: 10,358,551
effective HSP length: 16
effective length of query: 979
effective length of database: 10,329,639
effective search space: 10112716581
effective search space used: 10112716581
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)